JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0098.4 ETS1 Homo sapiens Tryptophan Ets-related
MA0099.1 Fos::Jun Mus musculus Basic Fos-related::Jun-related
MA0099.2 FOS::JUN Homo sapiens Mus musculus Rattus norvegicus Basic Fos-related::Jun-related
MA0099.3 FOS::JUN Homo sapiens Basic Fos-related::Jun-related
MA0099.4 FOS::JUN Homo sapiens Basic Fos-related::Jun-related
MA0100.1 Myb Mus musculus Tryptophan Myb/SANT
MA0100.2 Myb Mus musculus Tryptophan Myb/SANT
MA0100.3 MYB Homo sapiens Tryptophan Myb/SANT
MA0100.4 MYB Homo sapiens Tryptophan Myb/SANT
MA0101.1 REL Homo sapiens Rel NF-kappaB-related
Showing 10 profiles of page 26 from 428 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.