JASPAR CORE

  1. Home
  2. Collection core

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0722.2 VAX1 Homo sapiens Homeo NK
MA0723.1 VAX2 Homo sapiens Homeo NK
MA0723.2 VAX2 Homo sapiens Homeo NK
MA0723.3 VAX2 Homo sapiens Homeo NK
MA0724.1 VENTX Homo sapiens Homeo NK
MA0725.1 VSX1 Homo sapiens Homeo Paired-related
MA0725.2 VSX1 Homo sapiens Homeo Paired-related
MA0726.1 VSX2 Homo sapiens Homeo Paired-related
MA0726.2 VSX2 Homo sapiens Homeo Paired-related
MA0727.1 NR3C2 Homo sapiens Nuclear Steroid
Showing 10 profiles of page 144 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.