JASPAR Collection UNVALIDATED

  1. Home
  2. Collection UNVALIDATED

Total 999 profiles

These profiles are regarded as unvalidated because our curators failed to find any orthogonal support from existing literature. We encourage the community to perform experiments and/or point us to literature that our curators missed in order to support these profiles.
Display profiles
ID Name Species Class Family Sequence logo
UN0005.1 PK03025.1 Cannabis sativa AP2/EREBP ERF/DREB
UN0008.1 PK04914.1 Cannabis sativa Tryptophan Trihelix
UN0008.2 PK04914.1 Cannabis sativa Tryptophan Trihelix
UN0013.1 PK05732.1 Cannabis sativa Tryptophan GARP_G2-like
UN0013.2 PK05732.1 Cannabis sativa Tryptophan GARP_G2-like
UN0029.1 PK12011.1 Cannabis sativa Tryptophan MYB
UN0029.2 PK12011.1 Cannabis sativa Tryptophan MYB
UN0030.1 PK12240.1 Cannabis sativa TCP
UN0032.1 PK13314.1 Cannabis sativa TCP
UN0032.2 PK13314.1 Cannabis sativa TCP
UN0034.1 PK14653.1 Cannabis sativa TCP
UN0034.2 PK14653.1 Cannabis sativa TCP
UN0044.1 PK19166.1 Cannabis sativa Homeo
UN0047.1 PK19621.1 Cannabis sativa Tryptophan MYB
UN0047.2 PK19621.1 Cannabis sativa Tryptophan MYB
UN0054.1 PK20543.1 Cannabis sativa Tryptophan Trihelix
UN0054.2 PK20543.1 Cannabis sativa Tryptophan Trihelix
UN0067.1 PK25034.1 Cannabis sativa Homeo TALE-type
UN0067.2 PK25034.1 Cannabis sativa Homeo TALE-type
UN0072.1 PK27085.1 Cannabis sativa GCM NAC
UN0076.1 PK27683.1 Cannabis sativa CPP
UN0076.2 PK27683.1 Cannabis sativa CPP
UN0077.1 PK27693.1 Cannabis sativa Tryptophan MYB
UN0077.2 PK27693.1 Cannabis sativa Tryptophan MYB
UN0078.1 PK28187.1 Cannabis sativa Tryptophan Myb
UN0080.1 PHL3 Arabidopsis thaliana Tryptophan GARP_G2-like
UN0080.2 PHL3 Arabidopsis thaliana Tryptophan GARP_G2-like
UN0081.1 rsv2 Schizosaccharomyces pombe C2H2 Other
UN0081.2 rsv2 Schizosaccharomyces pombe C2H2 Other
UN0082.1 HCAG_04779 Histoplasma capsulatum C2H2 Other
UN0082.2 HCAG_04779 Histoplasma capsulatum C2H2 Other
UN0083.1 ada-1 Neurospora crassa Basic
UN0083.2 ada-1 Neurospora crassa Basic
UN0084.1 ada-3 Neurospora crassa C6
UN0085.1 clr-2 Neurospora crassa C6
UN0085.2 clr-2 Neurospora crassa C6
UN0086.1 col-24 Neurospora crassa C6
UN0086.2 col-24 Neurospora crassa C6
UN0087.1 NCU01074 Neurospora crassa Basic
UN0087.2 NCU01074 Neurospora crassa Basic
UN0088.1 NCU01629 Neurospora crassa C2H2 Other
UN0089.1 NCU03421 Neurospora crassa C2H2 More
UN0089.2 NCU03421 Neurospora crassa C2H2 More
UN0090.1 NCU04211 Neurospora crassa Basic
UN0090.2 NCU04211 Neurospora crassa Basic
UN0091.1 NCU05061 Neurospora crassa C2H2
UN0091.2 NCU05061 Neurospora crassa C2H2
UN0092.1 NCU05637 Neurospora crassa Basic
UN0093.1 NCU05909 Neurospora crassa C2H2 Other
UN0093.2 NCU05909 Neurospora crassa C2H2 Other
Showing 50 profiles of page 1 from 20 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.