JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0485.1 Hoxc9 Mus musculus Homeo HOX
MA0485.2 HOXC9 Homo sapiens Homeo HOX
MA0485.3 HOXC9 Homo sapiens Homeo HOX
MA0486.1 HSF1 Homo sapiens Heat HSF
MA0486.2 HSF1 Homo sapiens Heat HSF
MA0488.1 JUN Homo sapiens Basic Jun-related
MA0488.2 JUN Homo sapiens Basic Jun-related
MA0489.1 JUN Homo sapiens Basic Jun-related
MA0489.2 Jun Mus musculus Basic Jun-related
MA0489.3 Jun Mus musculus Basic Jun-related
Showing 10 profiles of page 94 from 428 pages

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Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.