JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0426.1 YHP1 Saccharomyces cerevisiae Homeo
MA0428.1 YKL222C Saccharomyces cerevisiae C6
MA0428.2 YKL222C Saccharomyces cerevisiae C6
MA0429.1 YLL054C Saccharomyces cerevisiae C6
MA0430.1 YLR278C Saccharomyces cerevisiae C6
MA0430.2 YLR278C Saccharomyces cerevisiae C6
MA0431.1 TDA9 Saccharomyces cerevisiae C2H2 Other
MA0431.2 TDA9 Saccharomyces cerevisiae C2H2 Other
MA0432.1 YNR063W Saccharomyces cerevisiae C6
MA0433.1 YOX1 Saccharomyces cerevisiae Homeo
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.