JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0199.1 Optix Drosophila melanogaster Homeo HD-SINE
MA0200.1 Pph13 Drosophila melanogaster Homeo Paired-related
MA0200.2 Pph13 Drosophila melanogaster Homeo Paired-related
MA0201.1 Ptx1 Drosophila melanogaster Homeo Paired-related
MA0202.1 Rx Drosophila melanogaster Homeo Paired-related
MA0203.1 Scr Drosophila melanogaster Homeo HOX
MA0204.1 Six4 Drosophila melanogaster Homeo HD-SINE
MA0205.1 Trl Drosophila melanogaster C2H2 More
MA0205.2 Trl Drosophila melanogaster C2H2 More
MA0205.3 Trl Drosophila melanogaster C2H2 More
Showing 10 profiles of page 47 from 428 pages

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Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.