JASPAR CORE

  1. Home
  2. Collection CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA2307.1 D19B Drosophila melanogaster C2H2 More
MA2308.1 da Drosophila melanogaster Basic E2A
MA2309.1 ewg Drosophila melanogaster Basic Jun-related
MA2310.1 fru Drosophila melanogaster C2H2 Factors
MA2311.1 ftz-f1 Drosophila melanogaster Nuclear FTZF1related(NR5A)
MA2312.1 grn Drosophila melanogaster Other C4-GATA-related
MA2313.1 hng1 Drosophila melanogaster C2H2 More
MA2314.1 hr3 Drosophila melanogaster Nuclear Thyroid
MA2315.1 insv Drosophila melanogaster
MA2316.1 l(3)neo38 Drosophila melanogaster C2H2 Three-zinc
Showing 10 profiles of page 414 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.