JASPAR CORE

  1. Home
  2. Collection CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA2287.1 TfAP-2 Drosophila melanogaster Basic AP-2
MA2288.1 tj Drosophila melanogaster Basic Maf-related
MA2289.1 toy Drosophila melanogaster Paired Paired
MA2290.1 Usf Drosophila melanogaster Basic bHLH-ZIP
MA2291.1 vri Drosophila melanogaster Basic CEBP-related
MA2292.1 wor Drosophila melanogaster C2H2 More
MA2293.1 Xbp1 Drosophila melanogaster Basic XBP-1-related
MA2294.1 Xrp1 Drosophila melanogaster
MA2295.1 ac Drosophila melanogaster Basic MyoD/ASC-related
MA2296.1 aop Drosophila melanogaster Tryptophan Ets-related
Showing 10 profiles of page 412 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.