JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA2097.1 ZNF75A Homo sapiens C2H2 More
MA2098.1 ZNF766 Homo sapiens C2H2 More
MA2099.1 ZNF770 Homo sapiens C2H2 Factors
MA2100.1 ZSCAN16 Homo sapiens C2H2 More
MA2101.1 ZNF677 Homo sapiens C2H2 More
MA2102.1 ZBTB17 Homo sapiens C2H2 Factors
MA2103.1 AT4G09450 Arabidopsis thaliana Tryptophan MYB-related
MA2104.1 IDD11 Arabidopsis thaliana C2H2 IDD
MA2105.1 GLYMA-13G317000 Glycine max Basic Group
MA2106.1 Zm00001d024644 Zea mays Tryptophan MYB-related
Showing 10 profiles of page 393 from 428 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.