JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0143.4 SOX2 Homo sapiens High-mobility SOX-related
MA0143.5 SOX2 Homo sapiens High-mobility SOX-related
MA0144.1 Stat3 Mus musculus STAT STAT
MA0144.2 STAT3 Homo sapiens STAT STAT
MA0144.3 STAT3 Homo sapiens STAT STAT
MA0145.1 Tfcp2l1 Mus musculus Grainyhead CP2-related
MA0145.2 Tfcp2l1 Mus musculus Grainyhead CP2-related
MA0146.1 Zfx Mus musculus C2H2 More
MA0146.2 Zfx Mus musculus C2H2 More
MA0146.3 Zfx Mus musculus C2H2 More
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Please select matrix profiles on the left side to add to your cart or perform the following analysis.


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Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.