JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1815.1 GRF4 Oryza sativa C3H GRF
MA1815.2 GRF4 Oryza sativa C3H GRF
MA1816.1 O11 Zea mays Basic bHLH
MA1816.2 O11 Zea mays Basic bHLH
MA1817.1 Zm00001d020267 Zea mays AP2/EREBP ERF/DREB
MA1817.2 Zm00001d020267 Zea mays AP2/EREBP ERF/DREB
MA1818.1 Zm00001d052229 Zea mays AP2/EREBP ERF/DREB
MA1819.1 Zm00001d005892 Zea mays AP2/EREBP ERF/DREB
MA1819.2 Zm00001d005892 Zea mays AP2/EREBP ERF/DREB
MA1820.1 Zm00001d024324 Zea mays AP2/EREBP ERF/DREB
Showing 10 profiles of page 343 from 428 pages

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Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.