JASPAR CORE

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Total 4279 profiles

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ID Name Species Class Family Sequence logo
MA1797.1 RAV2 Arabidopsis thaliana B3 RAV
MA1799.1 SPL10 Arabidopsis thaliana C3H(C),C2HC SBP
MA1799.2 SPL10 Arabidopsis thaliana C3H(C),C2HC SBP
MA1800.1 TEM1 Arabidopsis thaliana B3 RAV
MA1801.1 TREE1 Arabidopsis thaliana C2H2 C2H2
MA1801.2 TREE1 Arabidopsis thaliana C2H2 C2H2
MA1802.1 TRP5 Arabidopsis thaliana Tryptophan MYB-related
MA1802.2 TRP5 Arabidopsis thaliana Tryptophan MYB-related
MA1803.1 VIP1 Arabidopsis thaliana Basic Group
MA1803.2 VIP1 Arabidopsis thaliana Basic Group
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.