JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1449.2 hlh-30 Caenorhabditis elegans Basic bHLH-ZIP
MA1450.1 lin-54 Caenorhabditis elegans CRC
MA1450.2 lin-54 Caenorhabditis elegans CRC
MA1451.1 nhr-6 Caenorhabditis elegans Nuclear NGFI-B-related
MA1455.1 dmrt99B Drosophila melanogaster DM-type DMRT
MA1455.2 dmrt99B Drosophila melanogaster DM-type DMRT
MA1456.1 Dref Drosophila melanogaster C2H2 BED
MA1456.2 Dref Drosophila melanogaster C2H2 BED
MA1457.1 grh Drosophila melanogaster Grainyhead Grainyhead-related
MA1457.2 grh Drosophila melanogaster Grainyhead Grainyhead-related
Showing 10 profiles of page 280 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.