JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0748.1 YY2 Homo sapiens C2H2 More
MA0748.2 YY2 Homo sapiens C2H2 More
MA0748.3 YY2 Homo sapiens C2H2 More
MA0749.1 ZBED1 Homo sapiens C2H2 BED
MA0749.2 ZBED1 Homo sapiens C2H2 BED
MA0750.1 ZBTB7A Homo sapiens C2H2 More
MA0750.2 ZBTB7A Homo sapiens C2H2 More
MA0750.3 ZBTB7A Homo sapiens C2H2 More
MA0751.1 ZIC4 Homo sapiens C2H2 More
MA0751.2 ZIC4 Homo sapiens C2H2 More
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Please select matrix profiles on the left side to add to your cart or perform the following analysis.


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Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.